A Guide to Startup Taxes: How Accounting Firms Can Help

31 May 2025

A Guide to Startup Taxes: How Accounting Firms Can Help

Key Takeaways

  • Understand Your Tax Obligations: Startup taxes include federal income tax, payroll taxes, sales tax, and quarterly estimated taxes, each varying by business structure and state. Knowing these ensures compliance and avoids penalties.
  • Stay on Top of 2025 Deadlines: Key startup tax deadlines for 2025 include quarterly estimated taxes (April 15, June 15, September 15, January 15, 2026), C Corp federal returns (April 15), and state-specific sales tax filings. Missing these can lead to fines.
  • Leverage Professional Support: Partnering with an accounting firm for startups like SupportYourBooks simplifies tax planning, filing, and compliance, unlocking deductions like R&D credits and saving time.
  • Plan Strategically: Effective tax management involves proactive planning to reduce liabilities and align with your startup’s growth, supported by tailored tax services for startups.
  • Act Now: Don’t let startup taxes overwhelm you. Contact SupportYourBooks for expert guidance to keep your finances on track and focus on scaling your business.

Launching a startup is an exhilarating journey filled with innovation and growth, but navigating startup taxes can feel like a daunting maze. From federal income taxes to payroll and sales tax obligations, startups face unique financial challenges that require precision and expertise to avoid costly mistakes. At SupportYourBooks, a trusted accounting firm for startups, we simplify tax management with tailored tax services for startups and comprehensive accounting services for startups and small businesses. Whether you’re a first-time founder or a seasoned entrepreneur, our team provides the guidance you need to conquer tax complexities. Ready to streamline your finances? Explore how SupportYourBooks can support your startup’s financial needs and take the stress out of taxes.

Common Tax Obligations for Startups

Taxes are a critical part of running a startup, but understanding your obligations can be overwhelming. Below, we break down the most common taxes startups encounter, ensuring you’re prepared to stay compliant and avoid surprises.


  • Federal Income Tax: Your tax liability varies based on your business structure. For example, C Corporations file Form 1120, facing a flat 21% federal tax rate, while LLCs often pass income through to owners’ personal returns (Form 1040). Sole proprietors report business income on Schedule C. Choosing the right structure is key to optimizing your tax strategy.
  • Payroll Taxes: If you have employees, you’re responsible for withholding and remitting payroll taxes, including Social Security (6.2% employer portion), Medicare (1.45%), and federal/state unemployment taxes. Errors in payroll tax calculations can lead to penalties, making professional support essential.
  • Sales Tax:Startups selling taxable goods or services must collect and remit sales tax, which varies by state and sometimes by locality. For example, California’s sales tax rate ranges from 7.25% to 10.25%, while some states have no sales tax. Tracking these obligations can be complex, especially for e-commerce startups.
  • Quarterly Estimated Taxes: If your startup expects to owe more than $1,000 in taxes annually (or $500 for corporations), you must make quarterly estimated tax payments to the IRS. These payments cover income and self-employment taxes, helping you avoid underpayment penalties.
At SupportYourBooks, our tax services for startups include expert guidance to manage these obligations. We help you set up systems to track taxes, file accurately, and avoid costly errors. Don’t know where to start? Contact us for a free consultation to simplify your tax journey.

Key Tax Deadlines for Startups in 2025


Missing tax deadlines can result in hefty fines and stress, but staying organized keeps your startup on track.


For quarterly estimated taxes, startups expecting to owe more than $1,000 annually (or $500 for corporations) must make payments four times a year. These are due on April 15, June 15, September 15, 2025, and January 15, 2026. Individuals file these payments using Form 1040-ES, while corporations use Form 1120-W. Missing these deadlines can lead to underpayment penalties, so timely planning is essential.


The federal tax return for C Corporations is due by April 15, 2025, using Form 1120. If you need more time, you can request an extension to October 15, 2025, by filing Form 7004, though any taxes owed must still be paid by April 15 to avoid penalties. Sole proprietors and LLCs typically file with personal returns, also due April 15.


Payroll tax deposits depend on your payroll size. Smaller startups with modest payrolls make monthly deposits, due by the 15th of the following month, while those with larger payrolls follow a semi-weekly schedule (Wednesday or Friday, based on payroll dates). These deposits, reported via Form 941, cover Social Security, Medicare, and federal withholding taxes.


Sales tax deadlines vary by state and business size. In states like California, businesses with significant sales file monthly returns (e.g., via the California CDTFA), while smaller businesses may file quarterly or annually. For example, New York requires monthly filings for businesses with over $300,000 in annual sales. Check your state’s revenue department for specific deadlines to ensure compliance. Below are the critical startup tax deadlines for 2025, presented in a clear format to help you plan effectively.


  • Quarterly Estimated Taxes: These payments are due mid-month in April, June, September, and January. Missing these can lead to penalties, especially for freelancers or LLC owners with significant income.
  • Federal Tax Return (C Corp): C Corporations must file by April 15, 2025, or request an extension. Sole proprietors and LLCs file with personal returns, typically due April 15.
  • Payroll Tax Deposits: Depending on your payroll size, deposits are due monthly (by the 15th of the next month) or semi-weekly (Wednesday/Friday, based on payroll dates).
  • Sales Tax: Deadlines vary widely. For example, New York requires monthly filings for businesses with over $300,000 in annual sales, while smaller businesses may file quarterly.
SupportYourBooks’ tax services for startups include proactive deadline tracking and reminders, ensuring you stay compliant without the hassle. Let us manage your deadlines so you can focus on innovation.

How Accounting Firms Help Startups with Taxes


Navigating startup taxes requires more than just filing forms—it demands strategic planning to maximize savings and ensure compliance. Partnering with an accounting firm for startups like SupportYourBooks can make all the difference. Here’s how we support your startup’s tax needs:


  • Tax Planning: We identify valuable deductions and credits, such as the Research and Development (R&D) tax credit (up to 20% of qualified expenses), startup cost deductions (up to $5,000 in the first year), and home office deductions for remote founders. Our tailored strategies reduce your tax burden while aligning with your business goals.
  • Accurate Tax Filing: Our team ensures error-free filing of federal and state tax returns, including complex forms like 1120 for C Corps or Schedule C for sole proprietors. We also handle payroll and sales tax filings to prevent audits and penalties.
  • Ongoing Support: As your startup grows, we provide continuous support for payroll tax compliance, sales tax management, and tax advisory services. Whether you’re scaling to new states or hiring employees, we adapt your tax strategy to match your growth.
  • Customized Solutions: Every startup is unique. We customize your tax setup based on your industry (e.g., tech, e-commerce) and business structure, ensuring compliance and efficiency.
With years of experience, SupportYourBooks delivers expert accounting services for startups and small businesses. Our certified accountants help you navigate the complexities of startup taxes, saving you time and money.

Contact Support Your Books today for a FREE consultation. Let us handle the numbers while you build your future!